BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A09LP1|AL427704
(964 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1163 1856 0.0
>3x_Contig1163
Length = 3550
Score = 1856 bits (931), Expect = 0.0
Identities = 955/965 (98%), Gaps = 2/965 (0%)
Strand = Plus / Minus
Query: 1 gtcgtttctttagcacctctagaaggcttctagattccgatggtgttgttaaaaagcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3309 gtcgtttctttagcacctctagaaggcttctagattccgatggtgttgttaaaaagcctg 3250
Query: 61 ccccattcaatccacgtcatatgggggttgcaaaccaggtatatatcgcaccttccaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3249 ccccattcaatccacgtcatatgggggttgcaaaccaggtatatatcgcaccttccaaga 3190
Query: 121 maaatatgcctaatccaataacgtccccagtggcttatttcaatgtcttggtcaggaaga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3189 aaaatatgcctaatccaataacgtccccagtggcttatttcaatgtcttggtcaggaaga 3130
Query: 181 tctatacgttaggtatgaacaccattcaagtagccttattccgttatcaatcaggtctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3129 tctatacgttaggtatgaacaccattcaagtagccttattccgttatcaatcaggtctca 3070
Query: 241 agccaaattttttactgtggaagaacaaagctatcgaaacatatgttcaagttaatgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3069 agccaaattttttactgtggaagaacaaagctatcgaaacatatgttcaagttaatgaag 3010
Query: 301 cttttgctaaaagagaactggataccatcaaacctcaagtgtccatatgggttgacgagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3009 cttttgctaaaagagaactggataccatcaaacctcaagtgtccatatgggttgacgagg 2950
Query: 361 ctttgacagcgagagccaaacaaatcccatcgaacattaccttggactgggaattgatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2949 ctttgacagcgagagccaaacaaatcccatcgaacattaccttggactgggaattgatta 2890
Query: 421 aattcaatgaagtcccaaagttagtttccacacaagccatgatgattcccggtcgtccag 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2889 aattcaatgaagttccaaagttagtttccacacaagccatgatgattcccggtcgtccag 2830
Query: 481 ttgaattaattcaattgatttataagtttgataccaaacaaaggttaattaagttcgaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2829 ttgaattaattcaattgatttataagtttgataccaaacaaaggttaattaagttcgaca 2770
Query: 541 agaagaaaagtmaaactgataaactggacagagatgttattgactatatcgctttccttt 600
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2769 agaagaaaagtaaaactgataaactggacagagatgttattgactatatcgctttccttt 2710
Query: 601 gcgatgcaagcacaaatgatattctattaactggttctgtttttgagagtgcaccagacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2709 gcgatgcaagcacaaatgatattctattaactggttctgtttttgagagtgcaccagacg 2650
Query: 661 cgaaattgccaaaagatagcgaaacttcgaaccaaattgtaatcgaaagamtgamagtta 720
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 2649 cgaaattgccaaaagatagcgaaacttcgaaccaaattgtaatcgaaagaatgaaagtta 2590
Query: 721 acggagacttgttcagagttcaaccacctgttaaaamagactgataaaagtatatcttag 780
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2589 acggagacttgttcagagttcaaccacctgttaaaaaagactgataaaagtatatcttag 2530
Query: 781 taattaahaggcctcgctttacgatactaccttgtaaataccaatgtwaaaagatgatca 840
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2529 taattaaaaggcctcgctttacgatactaccttgtaaataccaatgt-aaaagatgatca 2471
Query: 841 ttaatgactatatttatttattttcagtaaattcatagacgtcgaagtacactaggttca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2470 ttaatgactatatttatttattttcagtaaattcatagacgtcgaagtacactaggttca 2411
Query: 901 tttaacgctatatgcaatacacttgagaacaatttcgaaattcaattatcgg-araacta 959
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 2410 tttaacgctatatgcaatacacttgagaacaatttcgaaattcaattatcggaagaacta 2351
Query: 960 gttaa 964
|||||
Sbjct: 2350 gttaa 2346
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6659
Number of Sequences: 1807
Number of extensions: 6659
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 964
length of database: 10,358,551
effective HSP length: 16
effective length of query: 948
effective length of database: 10,329,639
effective search space: 9792497772
effective search space used: 9792497772
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)